Department of Electrical and Computer Engineering

Faculty Directory

Faculty

Aluru, Srinivas -- Mehl Professor in Computer Engineering
351 Durham Hall
Ames IA 50011-3060		 Phone: 515-294-3539

 aluru@iastate.edu
WWW

Education

PhD, Computer Science, Iowa State University (1994)
MS, Computer Science, Iowa State University (1991)
BTech, Computer Science, Indian Institute of Technology (1989)

Research Interests

Parallel processing, bioinformatics and computational biology, combinatorial scientific computing, applied algorithms

Core Research Area: Software Systems

Strategic Plan Areas: Bioengineering and Cyber Infrastructure

Publications

Kalyanaraman, A., S. J. Emrich, P. S. Schnable, and S. Aluru. "Assembling Genomes on Large-scale Parallel Computers." Special Issue, Journal of Parallel and Distributed Computing 67, (2007): 1240-1255.

Ott, M., J. Zola, S. Aluru, and A. Stamatakis. "Large-scale Maximum Likelihood-based Phylogenetic Analysis on the IBM Blue Gene/L." In Proc. ACM/IEEE Supercomputing Conference, Reno, NV, 2007.

Kalyanaraman, A. and S. Aluru. "Efficient Algorithms and Software for Detection of Full-length LTR Retrotransposons." Journal of Bioinformatics and Computational Biology 4, no. 2, (2006): 197-216.

Aluru, S., ed. Handbook of Computational Molecular Biology, Chapman & Hall/CRC Computer and Information Science Series. Boca Raton, FL: Chapman & Hall/CRC, 2005.

Ko, P. and S. Aluru. "Space Efficient Linear Time Construction of Suffix Arrays." Journal of Discrete Algorithms 3, no. 24, (2005): 143-156.
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